ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 2V902.PDB
Scoring matrix: 2V902_mat
Uniprot code: P32169
Genome source: Escherichia coli (strain K12)
Wild-type ligand: ADRETSV
Foldx wt ligand score: 5.82
Foldx random average score for Escherichia coli (strain K12): 7.879

Available information for P32169 in MINT (Nov 2008):
Nš of interacting proteins: 0
 Proteins belonging to other specie: 0
Nš of interactions described: 0
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Escherichia coli (strain K12): 4340
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 26
Total scanned proteins: 4314
 Total fragments: 1337283
Proteins after random average filtering: 4314
 Total fragments: 693196
Proteins after disorder filtering: 1736
 Total fragments: 9628
Proteins after pattern filtering: 931
 Total fragments: 1864
Proteins after MINT filtering: 0
 Total fragments: 0


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

ADRETSV

5.82

-6.31

0.00

Best peptides

DHRMMWL

0.00

-11.97

-5.66

         
Interactors      

 


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