ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 2PLD2.PDB
Scoring matrix: 2PLD2_mat
Uniprot code: P08487
Genome source: Bos taurus
Wild-type ligand: DNDyIIPLPDPK
Foldx wt ligand score: 6.81
Foldx random average score for Bos taurus: 23.066

Available information for P08487 in MINT (Nov 2008):
Nš of interacting proteins: 4
 Proteins belonging to other specie: 4
Nš of interactions described: 16
 Interactions with other species: 16

Genome scanning information:
Subcellular location: False
Proteins in genome Bos taurus: 15166
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 3661
Total scanned proteins: 11505
 Total fragments: 4439961
Proteins after random average filtering: 11500
 Total fragments: 2516007
Proteins after disorder filtering: 8203
 Total fragments: 222477
Proteins after pattern filtering: 4155
 Total fragments: 32627
Proteins after MINT filtering: 0
 Total fragments: 0


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

DNDyIIPLPDPK

6.81

-4.53

0.00

Best peptides

yyYsVEGyPGyy

0.00

6.10

10.63

         
Interactors      

 


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