ADAN database

 

Scanning Information, ROC parameters and
Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 2NPM2.PDB
Scoring matrix: 2NPM2_mat
Uniprot code: Q5CUW0
Genome source: Cryptosporidium parvum Iowa II
Wild-type ligand: RAIsLP
Foldx wt ligand score: 2.16
Foldx random average score for Cryptosporidium parvum Iowa II: 9.997

Available information for Q5CUW0 in MINT (Nov 2008):
Nš of interacting proteins: 0
 Proteins belonging to other specie: 0
Nš of interactions described: 0
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Cryptosporidium parvum Iowa II: 3805
Proteins located in other compartments: 0
Proteins considered as fragments or having weird amino acids: 721
Total scanned proteins: 3084
 Total fragments: 1927767
Proteins after random average filtering: 3084
 Total fragments: 1088180
Proteins after disorder filtering: 2228
 Total fragments: 58245
Proteins after pattern filtering: 47
 Total fragments: 56
Proteins after MINT filtering: 0
 Total fragments: 0

ROC parameters:
TPR= 0.0
FPR= 0.0
ACC= 0.0
SPC= 0.0
MCC= 0.0

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

RAIsLP

2.16

-15.21

0.00

Best peptides

WLMsMW

0.00

-12.70

2.51

         
Interactors      

 


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