Matrix information:
(Help) ADAN-name: 2DRM3.PDB Scoring matrix: 2DRM3_mat Uniprot code: P19706 Genome source: Acanthamoeba castellanii Wild-type ligand: AKPAPPPR Foldx wt ligand score: 2.68 Foldx random average score for Acanthamoeba castellanii: 6.877 Available information for P19706 in MINT (Nov 2008): Nš of interacting proteins: 0 Proteins belonging to other specie: 0 Nš of interactions described: 0 Interactions with other species: 0
Genome scanning information:
Subcellular location: False Proteins in genome Acanthamoeba castellanii: 132
Proteins located in other compartments: 0 Proteins considered as fragments or having non-standard amino acids: 54 Total scanned proteins: 78 Total fragments: 28365 Proteins after random average filtering: 78 Total fragments: 14386 Proteins after disorder filtering: 27 Total fragments: 770 Proteins after pattern filtering: 17 Total fragments: 259 Proteins after MINT filtering: 0 Total fragments: 0
Prediction of know targets:
Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
Reference wt |
AKPAPPPR |
2.68
|
-9.48 |
0.00 |
Best peptides |
HRREMFGF |
0.00
|
-8.32 |
1.16 |
|
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Interactors |
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