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Matrix information:
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ADAN-name: 2DRM3.PDB
Scoring matrix: 2DRM3_mat
Uniprot code: P19706
Genome source: Acanthamoeba castellanii
Wild-type ligand: AKPAPPPR
Foldx wt ligand score: 2.68
Foldx random average score for Acanthamoeba castellanii: 6.877 Available information for P19706 in MINT (Nov 2008):
Nš of interacting proteins: 0
Proteins belonging to other specie: 0
Nš of interactions described: 0
Interactions with other species: 0
Genome scanning information:
Subcellular location: False
Proteins in genome Acanthamoeba castellanii: 132
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 54
Total scanned proteins: 78
Total fragments: 28365
Proteins after random average filtering: 78
Total fragments: 14386
Proteins after disorder filtering: 27
Total fragments: 770
Proteins after pattern filtering: 17
Total fragments: 259
Proteins after MINT filtering: 0
Total fragments: 0
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AKPAPPPR |
2.68
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-9.48 |
0.00 |
| Best peptides |
HRREMFGF |
0.00
|
-8.32 |
1.16 |
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