ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 2D1X2.PDB
Scoring matrix: 2D1X2_mat
Uniprot code: Q14247
Genome source: Homo sapiens
Wild-type ligand: KRPPPPPPG
Foldx wt ligand score: 6.17
Foldx random average score for Homo sapiens: 8.998

Available information for Q14247 in MINT (Nov 2008):
Nš of interacting proteins: 3
 Proteins belonging to other specie: 0
Nš of interactions described: 3
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 22829
Total scanned proteins: 48061
 Total fragments: 22152566
Proteins after random average filtering: 48042
 Total fragments: 10639365
Proteins after disorder filtering: 34860
 Total fragments: 872195
Proteins after pattern filtering: 25157
 Total fragments: 302704
Proteins after MINT filtering: 3
 Total fragments: 87


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

KRPPPPPPG

6.17

-11.52

0.00

Best peptides

RKRKHPKRR

0.00

-10.46

1.06

         
Interactors      
Q13153

DKPPAPPMR

3.77

-11.89

-0.37

KPPAPPMRN

5.68

-9.44

2.08

SKPLPPNPE

6.33

-7.95

3.57

O00401

VPPPPPNRM

4.70

-10.50

1.02

PPPPPPSRG

4.85

-9.83

1.69

GPPPPPARG

4.87

-10.26

1.26

Q13177

KPPAPPVRM

4.53

-10.99

0.53

DKPPAPPVR

5.13

-10.18

1.34

SLKPLPSVP

6.79

-7.35

4.17

 


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