ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 2C0O3.PDB
Scoring matrix: 2C0O3_mat
Uniprot code: P08631
Genome source: Homo sapiens
Wild-type ligand: MSSKPQKPWEKDA
Foldx wt ligand score: 6.55
Foldx random average score for Homo sapiens: 10.198

Available information for P08631 in MINT (Nov 2008):
Nš of interacting proteins: 16
 Proteins belonging to other specie: 7
Nš of interactions described: 37
 Interactions with other species: 17

Genome scanning information:
Subcellular location: False
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 22829
Total scanned proteins: 48061
 Total fragments: 21960385
Proteins after random average filtering: 48021
 Total fragments: 11405434
Proteins after disorder filtering: 33029
 Total fragments: 527812
Proteins after pattern filtering: 23501
 Total fragments: 214097
Proteins after MINT filtering: 7
 Total fragments: 159


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

MSSKPQKPWEKDA

6.55

-11.42

0.00

Best peptides

CFGHPGMMDWMRD

0.00

-13.43

-2.01

         
Interactors      
Q92556

PDAPPPIPKEPSN

6.64

-11.61

-0.19

DAPPPIPKEPSNY

10.15

-8.77

2.65

Q53H12

TGPTERPPNEPEE

9.41

-9.37

2.05

Q13177

EDKPPAPPVRMSS

6.75

-12.17

-0.75

KDGFPSGTPALNA

8.69

-8.56

2.86

PAPPVRMSSTIFS

9.21

-8.85

2.57

O43516

FSNRPPLPPTPSR

5.07

-12.75

-1.33

SRALPATPQLPSR

5.27

-11.29

0.13

LDDKPPPPPPPVG

6.78

-12.03

-0.61

P42768

RGGLPPLPLHPGG

5.44

-11.25

0.17

QLPRPPIVGGNKG

5.80

-11.42

0.00

EERRGGLPPLPLH

5.82

-11.99

-0.57

P21860

SCPLHPVPIMPTA

5.58

-10.93

0.49

LHPVPIMPTAGTT

6.74

-10.85

0.57

PLHPVPIMPTAGT

8.08

-10.32

1.10

Q13444

PPPRKPLPADPQG

6.29

-11.68

-0.26

KSQGPAKPPPPRK

6.40

-10.96

0.46

GSPLPSWPLPNIG

6.71

-11.41

0.01

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER