ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 2C0I3.PDB
Scoring matrix: 2C0I3_mat
Uniprot code: P08631
Genome source: Homo sapiens
Wild-type ligand: KPQKPWEKD
Foldx wt ligand score: 6.45
Foldx random average score for Homo sapiens: 10.391

Available information for P08631 in MINT (Nov 2008):
Nš of interacting proteins: 16
 Proteins belonging to other specie: 7
Nš of interactions described: 37
 Interactions with other species: 17

Genome scanning information:
Subcellular location: False
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 22829
Total scanned proteins: 48061
 Total fragments: 22152566
Proteins after random average filtering: 48041
 Total fragments: 10871392
Proteins after disorder filtering: 34590
 Total fragments: 605386
Proteins after pattern filtering: 24126
 Total fragments: 190587
Proteins after MINT filtering: 7
 Total fragments: 155


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

KPQKPWEKD

6.45

-10.74

0.00

Best peptides

RPEMIDWWW

0.00

-12.44

-1.70

         
Interactors      
Q92556

PPPIPKEPS

8.01

-10.98

-0.24

Q53H12

RPPNEPEET

9.44

-10.69

0.05

TERPPNEPE

9.56

-9.17

1.57

GPTERPPNE

10.02

-9.55

1.19

Q13177

KPPAPPVRM

7.22

-10.15

0.59

LKPLPSVPE

7.22

-10.55

0.19

PPAPPVRMS

7.40

-10.83

-0.09

O43516

RPPLPPTPS

5.16

-14.63

-3.89

TPRLPQRNL

6.01

-10.55

0.19

RPPLPPDRP

6.48

-16.34

-5.60

P42768

PPPLPPALV

5.80

-12.39

-1.65

RRQLPPPPT

6.03

-14.50

-3.76

RGGLPPLPL

6.26

-13.00

-2.26

P21860

VPIMPTAGT

6.79

-9.49

1.25

HPPRPSSLE

7.76

-11.15

-0.41

CPLHPVPIM

8.09

-10.48

0.26

Q13444

RKPLPADPQ

5.26

-13.55

-2.81

IPPLVVPSR

7.22

-11.98

-1.24

RPGPPQRAL

7.35

-11.51

-0.77

 


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