ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 1ZUK2.PDB
Scoring matrix: 1ZUK2_mat
Uniprot code: P47068
Genome source: Saccharomyces cerevisiae
Wild-type ligand: RGPAPPPPPHR
Foldx wt ligand score: 3.64
Foldx random average score for Saccharomyces cerevisiae: 11.339

Available information for P47068 in MINT (Nov 2008):
Nš of interacting proteins: 45
 Proteins belonging to other specie: 0
Nš of interactions described: 64
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3193184
Proteins after random average filtering: 7178
 Total fragments: 1466670
Proteins after disorder filtering: 4351
 Total fragments: 75335
Proteins after pattern filtering: 2241
 Total fragments: 20519
Proteins after MINT filtering: 31
 Total fragments: 946


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

RGPAPPPPPHR

3.64

-12.25

0.00

Best peptides

VGMDMPRIHGR

0.00

-11.77

0.48

         
Interactors      
Q06604

SFEKGPRMPSR

6.19

-10.94

1.31

SSSPPPLPTRR

6.55

-11.27

0.98

SSSSPPPLPTR

6.97

-11.48

0.77

P24583

PLPPQPRKHDK

8.24

-9.47

2.78

RANAPLPPQPR

8.30

-9.71

2.54

NAPLPPQPRKH

8.38

-10.61

1.64

Q06625

GVLTLPPIPLP

7.54

-8.24

4.01

AGSVGIPGTPR

8.07

-5.82

6.43

DGGPKQGPVTV

8.21

-5.81

6.44

P19812

APQNPPPILQF

7.21

-11.22

1.03

DDDAPQNPPPI

8.49

-6.90

5.35

PIFRPGNIFNP

8.53

-6.81

5.44

P53169

SVPIMPTLPPR

6.16

-10.67

1.58

PIMPTLPPRPY

8.04

-7.22

5.03

TANSVPIMPTL

8.41

-8.55

3.70

P39521

VDAQPKPKPAQ

8.67

-7.13

5.12

QTPHVPDRPPS

9.27

-9.12

3.13

TPHVPDRPPSQ

9.38

-6.03

6.22

P47068

SRTLPPHVPSL

6.83

-8.23

4.02

APPVPPATFEF

7.11

-9.57

2.68

APPVPPAPPAL

7.39

-7.96

4.29

Q12043

LPGVFPSTPLF

7.57

-8.71

3.54

PSPSPSTSPQR

7.65

-8.73

3.52

NTLFNPSRFPM

7.85

-9.07

3.18

P40453

WKPPDLPIRLR

6.82

-9.92

2.33

PSWKPPDLPIR

7.11

-11.50

0.75

PEIPPPLPPKI

7.42

-7.86

4.39

P53971

CGKVVNPDPNP

8.19

-5.36

6.89

INGEKACPFLP

9.50

-5.32

6.93

KCHPGKCPPCL

9.53

-5.32

6.93

Q12168

TNRGPPPLPPR

6.54

-10.86

1.39

VDNDDPYFPQF

7.46

-8.23

4.02

SGVDNDDPYFP

7.75

-5.24

7.01

P27472

RPLSVPGSPRD

9.84

-5.80

6.45

PGSPRDLRSNS

10.54

-4.93

7.32

PLSVPGSPRDL

11.09

-4.34

7.91

P36006

PPMGQPKDPKF

6.52

-10.05

2.20

QPKDPKFEAAY

6.85

-7.15

5.10

NIPIPPPPPPM

7.52

-8.74

3.51

P32790

EEGPPPAMPAR

5.22

-11.66

0.59

GGTTVPAAPVS

7.60

-6.80

5.45

PPPAMPARPTA

7.73

-8.42

3.83

Q06440

KDRTPKVEPSK

8.03

-6.37

5.88

TKKDRTPKVEP

10.74

-5.45

6.80

Q06412

KERRPPPPPPL

7.32

-9.00

3.25

TKPPPPLSTSR

7.48

-10.24

2.01

ERRPPPPPPLL

7.55

-8.13

4.12

Q12216

EGDLPPIPPVD

7.66

-6.94

5.31

IEGDLPPIPPV

8.13

-7.81

4.44

LGIEGDLPPIP

8.69

-5.38

6.87

P34226

EDFVPVPPPQL

7.74

-7.65

4.60

LGSTPTNSPSP

8.54

-5.41

6.84

EEDFVPVPPPQ

8.58

-7.88

4.37

P36102

SNYDPFNAPIF

7.33

-7.07

5.18

SNLKYPRIYPP

7.45

-8.85

3.40

LKYPRIYPPPH

8.21

-8.10

4.15

P53933

KRVAPPPLPNR

6.71

-11.45

0.80

RRPPPPPIPST

7.52

-8.07

4.18

TRRRPPPPPIP

8.21

-8.79

3.46

P40020

RVLPPLPFPLY

6.29

-8.70

3.55

FDRPPPLTPEK

7.76

-8.36

3.89

SRVLPPLPFPL

8.04

-8.14

4.11

P53739

PQEPSPKISDF

8.58

-7.80

4.45

SPPLSPTIPET

8.63

-5.47

6.78

SPASPPLSPTI

8.79

-7.01

5.24

Q12446

RGPAPPPPPHR

3.64

-12.27

-0.02

RLPAPPPPPRR

4.94

-13.75

-1.50

VRLPAPPPPPR

5.26

-11.48

0.77

P39969

SPRRAPKPPSY

5.50

-8.72

3.53

GGKALSPIPSP

6.84

-7.09

5.16

KALSPIPSPTR

6.88

-10.76

1.49

Q04195

LPTLPQNVPIR

5.24

-11.32

0.93

RGNEPIQFPFP

7.63

-6.14

6.11

SRGNEPIQFPF

7.83

-8.78

3.47

Q04439

PPSSKPKEPMF

6.77

-8.27

3.98

KPKEPMFEAAY

7.02

-7.58

4.67

ARPSPPTAATR

7.13

-10.00

2.25

P40563

TPAGTPNVPTR

5.42

-11.15

1.10

PSEVTPKVPER

5.54

-10.67

1.58

KRRAPPPVPKK

6.76

-8.70

3.55

P40325

PTSSQPRPPPR

5.76

-12.61

-0.36

NPSLPWTYPPR

6.30

-10.42

1.83

PSLPWTYPPRF

8.00

-8.95

3.30

P37370

PSMSAPPIPGM

5.97

-8.58

3.67

AGAPAPPPPPP

6.48

-7.70

4.55

SGASAPKVPQN

6.71

-6.68

5.57

Q07555

KVPKLPLPASR

7.57

-9.97

2.28

LNLSPQKVPTG

8.10

-7.48

4.77

KLPLPASRPSL

8.72

-7.44

4.81

Q05080

KPDKPRPIVGE

9.00

-6.85

5.40

QKPDKPRPIVG

9.27

-7.25

5.00

RQKPDKPRPIV

9.28

-6.05

6.20

 


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