ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 1VJ62.PDB
Scoring matrix: 1VJ62_mat
Uniprot code: Q64512
Genome source: Mus musculus
Wild-type ligand: YLVTSV
Foldx wt ligand score: 5.15
Foldx random average score for Mus musculus: 9.853

Available information for Q64512 in MINT (Nov 2008):
Nš of interacting proteins: 1
 Proteins belonging to other specie: 0
Nš of interactions described: 1
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Mus musculus: 58346
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 13900
Total scanned proteins: 44446
 Total fragments: 20553348
Proteins after random average filtering: 44446
 Total fragments: 10992616
Proteins after disorder filtering: 33670
 Total fragments: 808505
Proteins after pattern filtering: 24686
 Total fragments: 107511
Proteins after MINT filtering: 0
 Total fragments: 0


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

YLVTSV

5.15

-4.89

0.00

Best peptides

EGMIMV

0.00

-5.64

-0.75

         
Interactors      

 


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