ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 1TCE2.PDB
Scoring matrix: 1TCE2_mat
Uniprot code: P20963
Genome source: Homo sapiens
Wild-type ligand: GHDGLyQGLSTATK
Foldx wt ligand score: 21.97
Foldx random average score for Homo sapiens: 38.493

Available information for P20963 in MINT (Nov 2008):
Nš of interacting proteins: 1
 Proteins belonging to other specie: 0
Nš of interactions described: 1
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 22829
Total scanned proteins: 48061
 Total fragments: 21912354
Proteins after random average filtering: 48010
 Total fragments: 11918758
Proteins after disorder filtering: 34067
 Total fragments: 1174239
Proteins after pattern filtering: 18349
 Total fragments: 181236
Proteins after MINT filtering: 0
 Total fragments: 0


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

GHDGLyQGLSTATK

21.97

2.13

0.00

Best peptides

RpDspGyGGGGGGH

0.00

15.76

13.63

         
Interactors      

 


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