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Matrix information:
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ADAN-name: 1RLP2.PDB
Scoring matrix: 1RLP2_mat
Uniprot code: P00523
Genome source: Gallus gallus
Wild-type ligand: RALPPLPRY
Foldx wt ligand score: 0.95
Foldx random average score for Gallus gallus: 6.978 Available information for P00523 in MINT (Nov 2008):
Nš of interacting proteins: 4
Proteins belonging to other specie: 4
Nš of interactions described: 6
Interactions with other species: 6
Genome scanning information:
Subcellular location: False
Proteins in genome Gallus gallus: 7453
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 2119
Total scanned proteins: 5334
Total fragments: 2460134
Proteins after random average filtering: 5330
Total fragments: 1241987
Proteins after disorder filtering: 3988
Total fragments: 100906
Proteins after pattern filtering: 2629
Total fragments: 29949
Proteins after MINT filtering: 0
Total fragments: 0
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
RALPPLPRY |
0.95
|
-10.15 |
0.00 |
| Best peptides |
KPLPGRRRM |
0.00
|
-0.30 |
9.85 |
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