Matrix information:
(Help) ADAN-name: 1N7F2.PDB Scoring matrix: 1N7F2_mat Uniprot code: P97879 Genome source: Rattus norvegicus Wild-type ligand: ATVRTYSC Foldx wt ligand score: 7.45 Foldx random average score for Rattus norvegicus: 10.581 Available information for P97879 in MINT (Nov 2008): Nš of interacting proteins: 24 Proteins belonging to other specie: 6 Nš of interactions described: 65 Interactions with other species: 12
Genome scanning information:
Subcellular location: False Proteins in genome Rattus norvegicus: 15006
Proteins located in other compartments: 0 Proteins considered as fragments or having non-standard amino acids: 3052 Total scanned proteins: 11954 Total fragments: 5568889 Proteins after random average filtering: 11951 Total fragments: 2774125 Proteins after disorder filtering: 8103 Total fragments: 82526 Proteins after pattern filtering: 4815 Total fragments: 12063 Proteins after MINT filtering: 13 Total fragments: 35
Prediction of know targets:
Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
Reference wt |
ATVRTYSC |
7.45
|
-10.20 |
0.00 |
Best peptides |
KRWMMYMF |
0.00
|
-16.90 |
-6.70 |
|
|
|
|
|
Interactors |
|
|
|
|
Q9JHZ4 |
GDVLPISL |
9.11
|
-10.06 |
0.14 |
|
PPGDVLPI |
10.27
|
-8.33 |
1.87 |
P54256 |
VTHYGYSV |
8.19
|
-9.19 |
1.01 |
|
RQRSSMPA |
8.53
|
-10.31 |
-0.11 |
|
HYGYSVPL |
8.66
|
-9.97 |
0.23 |
P35400 |
NGEAKTEL |
9.85
|
-9.06 |
1.14 |
P31422 |
GQWPTADL |
9.79
|
-7.14 |
3.06 |
P31423 |
PHMNSIRI |
8.00
|
-12.04 |
-1.84 |
|
TLGGLFPV |
8.26
|
-10.04 |
0.16 |
|
RIDGDITL |
8.75
|
-8.16 |
2.04 |
Q91Z79 |
LATDPLGL |
8.81
|
-7.61 |
2.59 |
|
APLDPYGA |
9.14
|
-8.27 |
1.93 |
|
DPLGLAKL |
9.63
|
-8.11 |
2.09 |
Q9WUL3 |
MPQGSYMV |
5.83
|
-13.17 |
-2.97 |
|
GKKARLQL |
8.13
|
-11.26 |
-1.06 |
|
PQGSYMVV |
9.35
|
-9.41 |
0.79 |
P19493 |
LDSKGYGV |
8.43
|
-8.60 |
1.60 |
|
QPPNEFGI |
8.72
|
-9.80 |
0.40 |
P19492 |
LDSKGYGV |
8.43
|
-8.60 |
1.60 |
|
DPPNEFGI |
9.93
|
-8.33 |
1.87 |
P19491 |
LDSKGYGI |
8.62
|
-8.68 |
1.52 |
P19490 |
LDSKGYGI |
8.62
|
-8.68 |
1.52 |
|
SHSSGMPL |
8.74
|
-8.73 |
1.47 |
Q9QXY2 |
GDGYGFRL |
8.06
|
-10.69 |
-0.49 |
|
SGSSSVFA |
9.62
|
-7.77 |
2.43 |
|
QKLADVSA |
9.64
|
-7.25 |
2.95 |
Q3MUI2 |
LQPFSAPV |
9.10
|
-8.39 |
1.81 |
|
PTLQPFSA |
9.83
|
-8.64 |
1.56 |
|
VPPMPTMA |
10.10
|
-7.57 |
2.63 |
|