|
Matrix information:
(Help)
ADAN-name: 1GBR2.PDB
Scoring matrix: 1GBR2_mat
Uniprot code: Q60631
Genome source: Mus musculus
Wild-type ligand: LLPKLPPK
Foldx wt ligand score: 5.52
Foldx random average score for Mus musculus: 5.793 Available information for Q60631 in MINT (Nov 2008):
Nš of interacting proteins: 32
Proteins belonging to other specie: 6
Nš of interactions described: 55
Interactions with other species: 12
Genome scanning information:
Subcellular location: False
Proteins in genome Mus musculus: 58346
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 13900
Total scanned proteins: 44446
Total fragments: 20464456
Proteins after random average filtering: 44444
Total fragments: 10637107
Proteins after disorder filtering: 33007
Total fragments: 1038416
Proteins after pattern filtering: 20797
Total fragments: 118618
Proteins after MINT filtering: 24
Total fragments: 197
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
LLPKLPPK |
5.52
|
-3.75 |
0.00 |
| Best peptides |
FMGVDMRH |
0.00
|
3.40 |
7.15 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q62245 |
LKSPGVRP |
3.30
|
-1.67 |
2.08 |
|
YSYPLKSP |
4.33
|
-1.43 |
2.32 |
|
GVRPSNPR |
5.12
|
0.97 |
4.72 |
| Q02384 |
LKSPGIRP |
3.27
|
-1.67 |
2.08 |
|
SEEPLIPP |
4.15
|
-1.63 |
2.12 |
|
DPLPDTPP |
4.41
|
-0.29 |
3.46 |
| P39054 |
GIPPGVPS |
3.44
|
-1.27 |
2.48 |
|
IIRPAEPS |
3.58
|
-0.95 |
2.80 |
|
PSRPGPQS |
3.61
|
0.40 |
4.15 |
| P35991 |
LKKPLPPE |
4.94
|
-2.84 |
0.91 |
|
TKKPLPPT |
5.20
|
-2.92 |
0.83 |
|
PPTPEEDQ |
5.22
|
-0.82 |
2.93 |
| Q9Z1S8 |
PMNPGSST |
0.80
|
-1.85 |
1.90 |
|
PMSPGPHH |
1.28
|
-2.03 |
1.72 |
|
DFQPGSPS |
3.35
|
-0.26 |
3.49 |
| Q62077 |
DGPDGMPV |
3.89
|
0.16 |
3.91 |
|
GPDGMPVI |
5.35
|
-1.72 |
2.03 |
|
WDGPDGMP |
5.57
|
0.86 |
4.61 |
| P70424 |
PIRPAGAT |
3.24
|
-0.74 |
3.01 |
|
PCHPECQP |
3.64
|
-0.25 |
3.50 |
|
PLTPEGPP |
3.90
|
-2.34 |
1.41 |
| Q8R550 |
PPKPGTMA |
4.22
|
-0.19 |
3.56 |
|
PSVPAIPP |
4.27
|
0.67 |
4.42 |
|
PVGPLTHT |
4.31
|
-1.98 |
1.77 |
| Q923U0 |
DLSPIVPV |
4.67
|
-3.19 |
0.56 |
|
QISPNRPT |
5.00
|
-1.46 |
2.29 |
|
PSAPSCDL |
5.16
|
1.15 |
4.90 |
| O35716 |
PAVPAPAP |
4.51
|
0.49 |
4.24 |
|
SSSPAAPV |
4.62
|
1.15 |
4.90 |
|
RPCPAVPA |
5.69
|
0.87 |
4.62 |
| Q80U87 |
EMAPSSAP |
2.78
|
-1.90 |
1.85 |
|
LPTQMPPP |
5.29
|
-1.69 |
2.06 |
|
PPEMAPSS |
5.57
|
-0.03 |
3.72 |
| Q61234 |
AAEPGAAP |
3.16
|
0.29 |
4.04 |
|
DGEPGPEP |
3.36
|
0.42 |
4.17 |
|
PSSPGPQP |
3.59
|
0.45 |
4.20 |
| Q9JLQ0 |
PKMPGRRL |
3.22
|
-0.50 |
3.25 |
|
SEVPLTGP |
4.18
|
-1.54 |
2.21 |
|
PSKPAAPQ |
4.30
|
0.83 |
4.58 |
| Q60749 |
PSTPGPDA |
3.69
|
0.52 |
4.27 |
|
RASPATQP |
4.64
|
0.61 |
4.36 |
|
APTPLLPP |
5.05
|
-1.48 |
2.27 |
| Q99JZ7 |
PLTPIKSC |
4.41
|
-2.98 |
0.77 |
|
RVVPDPNP |
4.51
|
-1.31 |
2.44 |
|
GSRPLPPL |
4.58
|
-1.32 |
2.43 |
| Q9QUN3 |
PATPLKTT |
4.59
|
-1.54 |
2.21 |
|
SSLPAAPS |
4.64
|
1.24 |
4.99 |
|
GKKPATPL |
4.73
|
-0.04 |
3.71 |
| P04925 |
WNKPSKPK |
5.21
|
0.13 |
3.88 |
| Q9WU78 |
PGYPGYCQ |
2.45
|
0.21 |
3.96 |
|
PTYPGYPG |
3.19
|
0.44 |
4.19 |
|
TMPPAKPQ |
3.25
|
-2.00 |
1.75 |
| Q60992 |
RGDPDSPW |
2.86
|
-0.47 |
3.28 |
|
HGNPAPPG |
4.22
|
0.41 |
4.16 |
|
PAPPGKPV |
4.33
|
0.15 |
3.90 |
| P98083 |
LGPKGEPG |
3.71
|
0.09 |
3.84 |
|
PPLPGDDS |
4.39
|
0.25 |
4.00 |
|
PPCPGREL |
4.53
|
-0.25 |
3.50 |
| Q9EQ32 |
ASAPGPPP |
3.57
|
0.79 |
4.54 |
|
NLPPEISP |
5.34
|
-2.58 |
1.17 |
|
PPPPDNEP |
5.61
|
0.20 |
3.95 |
| Q61824 |
PGIPGQSI |
2.45
|
0.21 |
3.96 |
|
LWGPGAKP |
3.21
|
-1.64 |
2.11 |
|
PIRPAPKH |
3.38
|
-0.13 |
3.62 |
| Q91ZZ2 |
ASKPDGQP |
3.19
|
1.00 |
4.75 |
|
PPLPGIRV |
3.78
|
-0.90 |
2.85 |
|
PSSPASKP |
4.12
|
0.34 |
4.09 |
| Q9QYY0 |
PMTPGTFD |
1.58
|
-1.78 |
1.97 |
|
PMNPNLSG |
3.28
|
-2.02 |
1.73 |
|
PMNPNSPP |
3.31
|
-2.47 |
1.28 |
|
