ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 1CKA2.PDB
Scoring matrix: 1CKA2_mat
Uniprot code: Q64010
Genome source: Mus musculus
Wild-type ligand: PPPALPPKK
Foldx wt ligand score: 4.27
Foldx random average score for Mus musculus: 12.399

Available information for Q64010 in MINT (Nov 2008):
Nš of interacting proteins: 0
 Proteins belonging to other specie: 0
Nš of interactions described: 0
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Mus musculus: 58346
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 13900
Total scanned proteins: 44446
 Total fragments: 20420010
Proteins after random average filtering: 44444
 Total fragments: 9274971
Proteins after disorder filtering: 31799
 Total fragments: 923625
Proteins after pattern filtering: 23132
 Total fragments: 330195
Proteins after MINT filtering: 0
 Total fragments: 0


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

PPPALPPKK

4.27

-10.67

0.00

Best peptides

RPPFMPHRR

0.00

-14.64

-3.97

         
Interactors      

 


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