ADAN database

 

Scanning Information, ROC parameters and
Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 1A372.PDB
Scoring matrix: 1A372_mat
Uniprot code: P63104
Genome source: Homo sapiens
Wild-type ligand: RSTsTPN
Foldx wt ligand score: 32.0
Foldx random average score for Homo sapiens: 30.326

Available information for P63104 in MINT (Nov 2008):
Nš of interacting proteins: 310
 Proteins belonging to other specie: 3
Nš of interactions described: 374
 Interactions with other species: 6

Genome scanning information:
Subcellular location: False
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 0
Proteins considered as fragments or having weird amino acids: 22829
Total scanned proteins: 48061
 Total fragments: 22248677
Proteins after random average filtering: 48047
 Total fragments: 10806026
Proteins after disorder filtering: 37395
 Total fragments: 1856723
Proteins after pattern filtering: 3670
 Total fragments: 5980
Proteins after MINT filtering: 32
 Total fragments: 88

ROC parameters:
TPR= 0.103
FPR= 0.076
ACC= 0.919
SPC= 0.924
MCC= 0.008

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

RSTsTPN

32.00

-0.01

0.00

Best peptides

GGGGGGN

0.00

3.28

3.29

         
Interactors      
Q7Z401

RPPSTGV

27.81

0.68

0.69

DRPPSTG

29.28

0.46

0.47

O75592

RAESPGP

20.32

-2.60

-2.59

Q5T200

RSHTSGR

23.16

-0.27

-0.26

RSSSLGS

23.35

0.67

0.68

RTLTPPL

29.31

1.13

1.14

P54253

GRTASPP

27.03

3.52

3.53

RTASPPA

29.42

1.02

1.03

Q15007

RQRTSGS

26.67

0.78

0.79

P58340

RMRSVGH

30.32

3.53

3.54

P16471

RPGTDGG

18.75

-2.72

-2.71

WRPGTDG

23.38

3.97

3.98

Q9UDY2

RLNSHGG

26.91

7.81

7.82

O75044

RSDSHGL

23.85

0.96

0.97

Q08211

RGNSGGD

13.36

-0.90

-0.89

RGPSGGY

17.82

-0.71

-0.70

YRGPSGG

23.70

1.39

1.40

O60825

RNYSVGS

26.47

4.63

4.64

P15924

RASSKGG

21.15

0.54

0.55

Q7KZI7

RPSTAPQ

30.10

-0.28

-0.27

Q86YZ3

RSSSSGR

21.05

2.05

2.06

RSSSSGQ

21.79

2.28

2.29

RSSSSGP

22.48

0.99

1.00

P26358

RSKSDGE

23.99

1.41

1.42

Q7Z6B7

RSTSSGQ

21.90

1.88

1.89

RRSTSSG

29.02

1.47

1.48

Q9Y4H2

RPWTPGQ

27.31

-3.68

-3.67

Q6DD88

RGGSDPE

20.15

-1.96

-1.95

WRGGSDP

20.66

0.19

0.20

P49815

RSMSGGH

23.92

1.65

1.66

O96013

SREGSGG

18.99

-0.65

-0.64

REGSGGP

24.56

0.58

0.59

Q14764

RRVASGP

20.86

2.48

2.49

RVASGPS

27.53

0.57

0.58

Q7L8J4

GRRGSDG

24.56

1.09

1.10

RRGSDGG

25.61

-0.32

-0.31

Q15154

RSTSAPS

28.22

2.17

2.18

Q9UQ35

SRSGSSP

23.12

1.34

1.35

RSSTGPE

23.51

-0.27

-0.26

RCRSPGM

24.95

2.14

2.15

P55196

PRPASDG

22.31

0.31

0.32

RPDSGGT

23.28

0.17

0.18

RPASDGV

23.63

-0.19

-0.18

P30291

ARSPTEP

29.73

1.85

1.86

Q6Y7W6

RSSSRGR

28.84

2.10

2.11

GRSSSRG

29.90

2.33

2.34

Q96RK0

RPESVGG

24.07

-0.17

-0.16

RLHTVGG

26.17

3.74

3.75

ARVPSAP

29.20

-1.63

-1.62

O95644

RGETLGP

18.32

-3.12

-3.11

Q8WUI4

RAQSSPA

29.23

-0.86

-0.85

P34931

GRPATGP

22.59

3.62

3.63

Q5T5U3

RTTSPPL

28.73

0.98

0.99

 


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