INTERNAL ADAN INFORMATION

• Record: 754
• Number: 33
• Inclusion date: 21-VI-2005

WHOLE PROTEIN INFORMATION

• Domains within protein: UBIQ_RAT by SMART
• Basic UniProtKB Entry: UBIQ_RAT
• InterPro link: UBIQ_RAT
• Swiss-Prot ENTRY: UBIQ_RAT
• Swiss-Prot AC number: P62989
• Sequence: P62989
• Pfam database: UBIQ_RAT

ALIGNMENT

• BLAST against Swiss-Prot: P62989
• BLAST for whole protein: P62989
• SAS for whole protein: P62989
• BLAST for modular domain: 1Q5W
• SAS for domain: 1Q5W

PREDICTED INTERACTIONS AND EXPERIMENTAL DATA

• FoldX Results: 1Q5W2_mat 
• iPfam: UBQ
• PsiBase: 1Q5W
• MINT: whole protein: P62989 or domain: 1Q5W
• DOMINO database: P62989
• APID: P62989

• Title: UBIQUITIN RECOGNITION BY NPL4 ZINC-FINGERS
• Experimental Technique: NMR, 20 STRUCTURES
• Resolution Å: n/a
• Protein Source: Homo sapiens, rattus norvegicus
• Reference: Alam et al. 2004 EMBO J 23, 1411-21
• Sequence domain: seqA_1q5w2.txt
• Peptide sequence of ligand: MWACQHCTFMNQPGTGHCEM
• Biochemical affinity data for: 1Q5W
• Drugs:
• Phosphorylated residue type:
• Pfam family: UBQ
• Pfam structure: 1Q5W
• RCSB_PDB_ID: 1Q5W
• SMART: UBQ
• PDBsum (domain): 1Q5W
• PDBsum (Ligand): 1Q5W
• MSD (summary): 1Q5W
• MSD (ligands): 1Q5W
• Molecular Surface: 1Q5W

PDB1: Original Protein Data Bank file.

PDB2: Simplified coordinate files.