INTERNAL ADAN INFORMATION

• Record: 999
• Number: 42
• Inclusion date: 30-V-2006

WHOLE PROTEIN INFORMATION

• Domains within protein: SDCB1_HUMAN by SMART
• Basic UniProtKB Entry: SDCB1_HUMAN
• InterPro link: SDCB1_HUMAN
• Swiss-Prot ENTRY: SDCB1_HUMAN
• Swiss-Prot AC number: O00560
• Sequence: O00560
• Pfam database: SDCB1_HUMAN

ALIGNMENT

• BLAST against Swiss-Prot: O00560
• BLAST for whole protein: O00560
• SAS for whole protein: O00560
• BLAST for modular domain: 1YBO
• SAS for domain: 1YBO

PREDICTED INTERACTIONS AND EXPERIMENTAL DATA

• FoldX Results: 1YBO2_mat 
• iPfam: PDZ
• PsiBase: 1YBO
• MINT: whole protein: O00560 or domain: 1YBO
• DOMINO database: O00560
• APID: O00560

• Title: Crystal structure of the pdz tandem of human syntenin with syndecan peptide
• Experimental Technique: X-RAY DIFFRACTION
• Resolution Å: 2.30
• Protein Source: Homo sapiens
• Reference: Grembecka, J., Cooper, D.R., Cierpicki, T., Kang, B.S., Devedjiev, Y., Derewenda, Z. Crystal structure of the PDZ tandem of human syntenin with syndecan peptide To be published
• Sequence domain: seqA_1ybo2.txt
• Peptide sequence of ligand: TNEFYA
• Biochemical affinity data for: 1ybo
• Drugs:
• Phosphorylated residue type:
• Pfam family: PDZ
• Pfam structure: 1YBO
• RCSB_PDB_ID: 1YBO
• SMART: PDZ
• PDBsum (domain): 1YBO
• PDBsum (Ligand): 1YBO
• MSD (summary): 1YBO
• MSD (ligands): 1YBO
• Molecular Surface: 1ybo

PDB1: Original Protein Data Bank file.

PDB2: Simplified coordinate files.