Predicted ligand sequences (modelled structure)
ADAN-name: BUD14_1GCQ-12.PDB (view again the scoring matrix)
Starting poly-Ala
ligand sequence and binding properties
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Grey: Restrictive positions;
only 1 or 2 residues predicted after FoldX analysis
Yellow: Tolerant positions;
more than 10 residues predicted after FoldX analysis
WT ligand |
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Intraclash |
1.129 |
ΔGbinding |
-1.671 |
TOTAL |
-0.542 |
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Backbone Hb |
-0.637 |
Cis_bond |
0.000 |
Sidechain Hb |
-0.637 |
Torsional clash |
0.302 |
Van der Waals |
-1.689 |
Backbone clash |
0.000 |
Electrostatics |
-0.083 |
Helix dipole |
0.000 |
Solvation Polar |
1.883 |
Water bridges |
-0.085 |
Solvation Hyd |
-2.497 |
Disulfide |
0.000 |
VdW clashes |
0.061 |
Electrost. Kon |
-0.074 |
Entropy sc |
0.306 |
Part.cov.bonds
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0.000 |
Entropy mc |
1.478 |
ΔGstability |
23.596 |
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Predicted ligand sequences
for model [BUD14_1GCQ-12.PDB]
(from FoldX scoring matrices).
If your favourite sequence is not included in this
list, please visit the ADAN section
Prediction
from a query sequence).
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