Predicted ligand sequences (modelled structure)
ADAN-name: BEM1-D1_JO8-LCK-20.PDB (view again the scoring matrix)
Starting poly-Ala
ligand sequence and binding properties
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Grey: Restrictive positions;
only 1 or 2 residues predicted after FoldX analysis
Yellow: Tolerant positions;
more than 10 residues predicted after FoldX analysis
WT ligand |
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Intraclash |
9.298 |
ΔGbinding |
-3.462 |
TOTAL |
5.836 |
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Backbone Hb |
-1.275 |
Cis_bond |
0.000 |
Sidechain Hb |
-1.275 |
Torsional clash |
0.196 |
Van der Waals |
-4.592 |
Backbone clash |
0.135 |
Electrostatics |
-0.286 |
Helix dipole |
0.000 |
Solvation Polar |
5.377 |
Water bridges |
-0.000 |
Solvation Hyd |
-6.426 |
Disulfide |
0.000 |
VdW clashes |
0.823 |
Electrost. Kon |
-0.289 |
Entropy sc |
0.951 |
Part.cov.bonds
|
0.000 |
Entropy mc |
3.336 |
ΔGstability |
51.053 |
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Predicted ligand sequences
for model [BEM1-D1_JO8-LCK-20.PDB]
(from FoldX scoring matrices).
If your favourite sequence is not included in this
list, please visit the ADAN section
Prediction
from a query sequence).
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