Predicted ligand sequences


ADAN-name: 1ZSG2.PDB (view again the scoring matrix)

PDB name: [1ZSG.PDB]

Wild-type ligand sequence and binding properties                 (Help)

WT P V I A P R P E H T K S V Y T R S
position 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
poly-Ala A A A
A
A
 A
A
A
A
A
A
A
A
A
A
A
A

Grey: Restrictive positions; only 1 or 2 residues predicted after FoldX analysis

Yellow: Tolerant positions; more than 10 residues predicted after FoldX analysis

 

WT ligand    

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Intraclash 5.207 ΔGbinding -2.010
TOTAL
 3.197
Backbone Hb -0.580 Cis_bond 0.000
Sidechain Hb -1.460 Torsional clash 0.040
Van der Waals -7.130 Backbone clash 0.740
Electrostatics -1.690 Helix dipole 0.000
Solvation Polar 9.510 Water bridges -0.190
Solvation Hyd -8.730 Disulfide 0.000
VdW clashes 0.300 Electrost. Kon -1.320
Entropy sc 4.150 Part.cov.bonds 0.000
Entropy mc

5.080

 ΔGstability

60.380
       

Predicted ligand sequences for template [1ZSG2.PDB]

(from FoldX scoring matrices).
If your favourite sequence is not included in this list, please visit the ADAN section Prediction from a query sequence).
 
  1ZSG2.PDB  

(data)
# Predicted Sequences Value Calculate
1 RDIARARCCGWRHHRRG 0.0
2 RDIARARAAGWRHHRRG 0.0
3 RDIARARCGGWRHHRRG 0.0
4 RDIARARECGWRHHRRG 0.0
5 RDIARARCAGWRHHRRG 0.0
6 RDIARARCAGWGHHRRG 0.0
7 RDIARARACGWGHHRRG 0.0
8 RDIARARAGGWGHHRRG 0.0
9 RDIARARECGWGHHRRG 0.0
10 RDIARAREGGWRHHRRG 0.0
11 RDIARARCCGWGHHRRG 0.0
12 RDIARARCGGWGHHRRG 0.0
13 RDIARARAAGWGHHRRG 0.0
14 RDIARAREGGWGHHRRG 0.0
15 RDIARAREAGWGHHRRG 0.0
16 RDIARARACGWRHHRRG 0.0
17 RDIARARAGGWRHHRRG 0.0
18 RDIARAREAGWRHHRRG 0.0
19 RDLARARCGGWRHHRRG 0.01
20 RDLARAREGGWGHHRRG 0.01
21 RDLARARCGGWGHHRRG 0.01
22 RDLARARECGWRHHRRG 0.01
23 RDLARARAGGWGHHRRG 0.01
24 RDLARARCCGWRHHRRG 0.01
25 RDLARAREGGWRHHRRG 0.01
26 RDLARARACGWRHHRRG 0.01
27 RDLARARCAGWRHHRRG 0.01
28 RDLARARAAGWGHHRRG 0.01
29 RDLARARAAGWRHHRRG 0.01
30 RDLARARCAGWGHHRRG 0.01
31 RDLARARECGWGHHRRG 0.01
32 RDLARARAGGWRHHRRG 0.01
33 RDLARAREAGWGHHRRG 0.01
34 RDLARAREAGWRHHRRG 0.01
35 RDLARARCCGWGHHRRG 0.01
36 RDLARARACGWGHHRRG 0.01
37 RDIARARCAGWRHHHRG 0.03
38 RDIARAREGGWRHHHRG 0.03
39 RDIARARAGGWRHHHRG 0.03
40 RDIARARECGWRHHHRG 0.03
41 RDIARARAGGWGHHHRG 0.03
42 RDIARAREAGWGHHHRG 0.03
43 RDIARARCCGWRHHHRG 0.03
44 RDIARARCGGWRHHHRG 0.03
45 RDIARARAAGWRHHHRG 0.03
46 RDIARARCGGWGHHHRG 0.03
47 RDIARARACGWGHHHRG 0.03
48 RDIARARAAGWGHHHRG 0.03
49 RDIARARCCGWGHHHRG 0.03
50 RDIARARECGWGHHHRG 0.03
51 RDIARARCAGWGHHHRG 0.03
52 RDIARAREAGWRHHHRG 0.03
53 RDIARARACGWRHHHRG 0.03
54 RDIARAREGGWGHHHRG 0.03
55 RDLARARACGWRHHHRG 0.04
56 RDLARARCGGWGHHHRG 0.04
57 RDLARARCAGWGHHHRG 0.04
58 RDLARAREAGWRHHHRG 0.04
59 RDLARARCAGWRHHHRG 0.04
60 RDLARARECGWRHHHRG 0.04
61 RDLARAREGGWGHHHRG 0.04
62 RDLARAREAGWGHHHRG 0.04
63 RDMARARCCGWRHHRRG 0.04
64 RDLARARCCGWRHHHRG 0.04
65 RDMARARAAGWRHHRRG 0.04
66 RDLARARCCGWGHHHRG 0.04
67 RDLARARACGWGHHHRG 0.04
68 RDMARARECGWGHHRRG 0.04
69 RDMARARACGWGHHRRG 0.04
70 RDMARAREAGWRHHRRG 0.04
71 RDMARARACGWRHHRRG 0.04
72 RDLARARAAGWRHHHRG 0.04
73 RDLARARAAGWGHHHRG 0.04
74 RDMARARCGGWGHHRRG 0.04
75 RDLARARECGWGHHHRG 0.04
76 RDMARARAAGWGHHRRG 0.04
77 RDMARARAGGWRHHRRG 0.04
78 RDMARAREGGWRHHRRG 0.04
79 RDMARARCAGWRHHRRG 0.04
80 RDMARAREAGWGHHRRG 0.04
81 RDMARARCGGWRHHRRG 0.04
82 RDLARARCGGWRHHHRG 0.04
83 RDLARAREGGWRHHHRG 0.04
84 RDMARARECGWRHHRRG 0.04
85 RDMARAREGGWGHHRRG 0.04
86 RDMARARCCGWGHHRRG 0.04
87 RDMARARCAGWGHHRRG 0.04
88 RDMARARAGGWGHHRRG 0.04
89 RDLARARAGGWGHHHRG 0.04
90 RDLARARAGGWRHHHRG 0.04
  (binding_energy)(dif)  (stability_energy)(dif)

(data)

  

(Help)
# Precalculated Models Intraclash ΔGbinding Total
1 RDIARARCAGWRHHRRG

4.47

-9.27

-4.8
2 RDIARAREAGWRHHRRG

4.36

-9.11

-4.75
3 RDIARARAAGWGHHRRG

4.68

-9.2

-4.52
4 RDIARARAAGWRHHRRG

4.29

-8.72

-4.43
5 RDLARARCAGWGHHRRG

4.42

-8.78

-4.36
6 RDIARARAGGWGHHRRG

4.26

-8.43

-4.17
7 RDIARAREGGWGHHRRG

4.29

-8.02

-3.73
8 RDLARAREGGWRHHRRG

4.87

-8.44

-3.57
9 RDIARARAGGWRHHRRG

4.44

-7.96

-3.52
10 RDIARARCGGWRHHRRG

4.43

-7.89

-3.46
11 RDIARARECGWRHHRRG

4.53

-7.93

-3.4
12 RDLARARECGWRHHRRG

3.37

-6.66

-3.29
13 RDIARARCCGWRHHRRG

4.41

-7.53

-3.12
14 RDIARAREGGWRHHRRG

4.62

-7.66

-3.04
15 RDIARARACGWGHHRRG

4.43

-7.42

-2.99
16 RDIARARACGWRHHRRG

4.04

-6.99

-2.95
17 RDIARARCAGWGHHRRG

4.22

-7.16

-2.94
18 RDLARARAGGWGHHRRG

4.69

-7.57

-2.88
19 RDLARARAAGWRHHRRG

4.85

-7.72

-2.87
20 RDLARARACGWRHHRRG

4.78

-7.52

-2.74
21 RDIARAREAGWGHHRRG

4.57

-7.29

-2.72
22 RDLARARCCGWRHHRRG

4.68

-7.38

-2.7
23 RDLARARCGGWRHHRRG

4.42

-6.91

-2.49
24 RDLARARCGGWGHHRRG

4.48

-6.74

-2.26
25 RDIARARCCGWGHHRRG

4.18

-6.38

-2.2
26 RDLARARAAGWGHHRRG

4.64

-6.77

-2.13
27 RDLARARCAGWRHHRRG

5.0

-7.05

-2.05
28 RDLARAREGGWGHHRRG

4.63

-6.4

-1.77
29 RDIARARECGWGHHRRG

4.16

-5.79

-1.63
30 RDIARARCGGWGHHRRG

4.04

-5.34

-1.3

 NOTE: No more than 10 sequences can be selected for new calculations.

If your favourite sequence is not included in this list, please visit the ADAN section Prediction from a query sequence.

NOTE: No more than 10 sequences can be selected for new calculations.

If your favourite sequence is not included in this list, please visit the ADAN section Prediction from a query sequence.

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