ADAN database

Help mscoring

 

One and three code letter for natural and phosphorylated amino acids.                           (Please read this help!)

1GBQ2

Normalized sum of energies

 

# ALA ARG ASN ASP CYS GLN GLU GLY HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL optimum
1 0.03
0.0
 0.08 0.1 0.06 0.06 0.07 0.05 0.07 0.09 0.08 0.04 0.06 0.12 0.15 0.06 0.03 0.09 0.09 0.06
R
ATKGCQMSVEHNLIWYDFP
2 0.348
0.0
 1.104 2.099 0.706 1.803 2.197 1.061 0.305 4.779 1.832 1.148 0.161 1.205 0.031 1.544 2.7 1.389 1.097 2.572
R
PMHA
3 2.804 1.036 1.624 1.889 2.87 0.96 2.109 2.945 2.79 1.995 2.386 2.034 2.186 1.488
0.0
 3.078 3.018 2.261 1.895 2.437
P
4 0.074 0.157 0.201 0.199 0.099 0.116 0.046 0.006 1.924 0.059 0.11 0.044 0.084 0.069 0.019 0.094
0.0
 0.074 0.142 0.029
T
GPVKEIFAWMSCLQYRDN
5 1.699 1.031 2.087 1.983 1.579 1.184 2.02 1.806 1.649 0.667 1.051 0.75
0.0
 1.564 1.464 2.188 1.551 1.395 1.561 0.575
M
6 0.191 2.036 1.635 1.613 0.334 1.819 2.606 1.232 2.099 1.601 4.225 4.225 3.742 0.058
0.0
 0.559 2.284 1.383 0.76 2.928
P
FAC
7 0.2
0.0
 0.18 0.42 0.16 0.21 0.38 0.22 0.06 0.13 0.14 0.1 0.13 0.13 0.32 0.22 0.12 0.16 0.13 0.14
R
HKTIMFYLVCWNAQGSPED
8 2.692
0.0
 1.266 6.002 2.203 1.901 5.241 3.107 0.59 1.954 2.551 2.0 1.069 0.783 2.721 2.997 3.655 2.33 0.709 3.088
R
9 0.639
0.0
 0.585 1.028 0.712 0.645 0.785 0.715 0.265 0.645 0.645 0.236 0.585 0.665 2.453 0.655 0.659 0.615 0.665 0.625
R
KH
10 0.843
0.0
 0.843 1.334 0.883 0.499 1.115 0.783 0.403 0.803 0.539 0.523 0.929 0.703 1.074 0.883 0.914 1.373 0.693 0.923
R
HQ


Binding energies

# ALA ARG ASN ASP CYS GLN GLU GLY HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL optimum
1 -7.480 -7.510 -7.430 -7.410 -7.450 -7.450 -7.440 -7.460 -7.440 -7.420 -7.430 -7.470 -7.450 -7.390 -7.360 -7.450 -7.480 -7.420 -7.420 -7.450
R
ATKGCQMSVEHNLIWYDFP
2 -7.500 -8.120 -7.600 -5.840 -7.210 -6.810 -6.470 -6.680 -8.390 -4.370 -6.860 -7.460 -8.090 -6.780 -7.710 -6.320 -5.260 -6.600 -8.250 -5.370
H
YRM
3 -5.830 -7.950 -7.560 -6.760 -5.780 -8.010 -6.540 -5.340 -6.060 -6.750 -6.600 -6.660 -6.440 -6.900 -8.510 -5.550 -5.330 -6.380 -6.740 -6.280
P
Q
4 -7.480 -7.490 -7.450 -7.540 -7.460 -7.450 -7.570 -7.480 -5.630 -7.440 -7.450 -7.510 -7.470 -7.430 -7.480 -7.460 -7.500 -7.480 -7.420 -7.470
E
DKTRAGPWMVCSNQLIFY
5 -7.480 -8.290 -7.270 -7.220 -7.600 -7.950 -7.320 -6.740 -7.560 -8.790 -8.130 -8.460 -9.180 -7.620 -7.720 -7.000 -7.690 -7.790 -7.630 -8.820
M
VI
6 -7.560 -5.670 -7.620 -5.940 -7.500 -5.860 -5.040 -6.610 -6.350 -6.390 -6.450 -6.100 -6.670 -7.900 -7.530 -7.200 -5.310 -6.700 -7.250 -5.160
F
NAPC
7 -7.480 -7.680 -7.500 -7.260 -7.520 -7.470 -7.300 -7.460 -7.620 -7.550 -7.540 -7.580 -7.550 -7.550 -7.360 -7.460 -7.560 -7.520 -7.550 -7.540
R
HKTIMFYLVCWNAQGSPED
8 -7.470 -10.520 -8.850 -5.200 -7.960 -8.610 -5.260 -7.040 -9.510 -9.250 -8.540 -8.320 -9.480 -10.200 -7.560 -7.170 -7.560 -8.410 -10.440 -8.140
R
YF
9 -7.480 -8.110 -7.520 -7.080 -7.510 -7.460 -7.320 -7.390 -7.840 -7.460 -7.460 -7.870 -7.520 -7.440 -7.570 -7.450 -7.530 -7.490 -7.440 -7.480
R
KH
10 -7.480 -8.840 -7.480 -6.990 -7.440 -8.190 -7.210 -7.540 -7.920 -7.520 -8.150 -7.800 -7.760 -7.620 -7.620 -7.440 -7.410 -7.380 -7.630 -7.400
R


Stability energies

# ALA ARG ASN ASP CYS GLN GLU GLY HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL optimum
1 38.930 38.940 38.970 38.980 38.950 38.940 38.960 38.920 38.470 39.040 38.990 38.920 38.970 39.040 39.030 38.950 38.940 38.980 39.060 38.970
H
GKARQTCSENMV
2 38.930 39.340 40.420 40.780 39.730 40.960 40.810 40.060 39.760 43.660 40.900 40.350 39.480 40.790 37.920 40.010 41.430 40.770 40.850 41.690
P
3 40.590 38.850 39.600 39.950 41.340 38.850 40.080 41.250 40.680 40.780 40.720 40.120 40.890 40.070 36.210 40.890 41.600 40.550 40.480 41.070
P
4 38.930 38.760 38.870 38.250 38.700 38.150 38.620 39.240 40.700 38.370 38.710 38.190 38.820 38.620 38.650 38.870 38.380 38.360 38.680 38.400
Q
KDWITVEFP
5 38.120 37.840 38.620 38.380 38.510 38.080 38.260 39.440 38.360 37.330 37.530 37.430 37.030 38.150 37.150 38.830 38.000 38.290 38.190 37.160
M
PVIKL
6 37.870 40.320 40.320 40.340 38.520 40.260 40.540 38.910 41.650 40.950 43.480 43.730 43.330 39.210 37.090 38.060 40.810 40.950 39.890 42.110
P
7 38.930 38.370 38.380 38.640 38.570 38.610 38.790 39.320 38.460 38.160 38.170 37.770 38.150 37.850 38.320 38.950 38.510 38.130 38.010 38.300
K
FYWMIL
8 37.790 35.420 36.400 40.310 37.610 37.110 40.620 38.600 36.030 37.630 37.380 37.240 36.130 35.680 37.110 38.250 39.170 37.630 35.490 38.590
R
YF
9 38.720 37.770 37.150 38.120 38.330 38.130 39.050 39.130 37.940 39.370 37.940 37.480 37.740 38.390 40.950 38.000 38.740 38.480 38.420 38.980
N
K
10 38.930 38.030 38.960 39.460 39.010 38.120 39.300 38.910 38.550 39.200 38.230 38.680 38.320 38.970 38.890 39.070 39.060 39.020 38.900 39.170
R
QLM

footer

    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                      DISCLAIMER