ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: ABP1_1JO8-12.PDB
Scoring matrix: ABP1_1JO8-12_mat
Uniprot code: P15891
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 17.58
Foldx random average score for Saccharomyces cerevisiae: 15.011

Available information for P15891 in MINT (Nov 2008):
Nš of interacting proteins: 39
 Proteins belonging to other specie: 0
Nš of interactions described: 88
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2181254
Proteins after random average filtering: 5078
 Total fragments: 917690
Proteins after disorder filtering: 3136
 Total fragments: 64257
Proteins after pattern filtering: 1522
 Total fragments: 9561
Proteins after MINT filtering: 26
 Total fragments: 341


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

17.58

-0.61

0.00

Best peptides

WRRRRRRK

0.00

-7.79

-7.18

         
Interactors      
P09119

PTTSPVKK

13.53

-1.91

-1.30

SAQVPLTP

14.29

-3.68

-3.07

LTPTTSPV

14.31

-1.29

-0.68

P40325

PRPPPRPQ

6.88

-5.79

-5.18

SRPHQRPS

7.50

-5.63

-5.02

QSQPPRPP

8.34

-5.36

-4.75

P53145

PGQPPLIN

13.00

-4.02

-3.41

PNEPLLPP

13.29

-3.99

-3.38

NEPLLPPL

14.05

-2.26

-1.65

P48562

NPYRPHHN

8.89

-5.46

-4.85

IGPAPRPP

9.21

-4.84

-4.23

RQAPKRPD

9.30

-5.24

-4.63

P17555

SGPPPRPK

7.74

-5.57

-4.96

PPPRPKKP

9.47

-6.92

-6.31

PRPKKPST

11.50

-4.56

-3.95

P40494

KSRPPRPP

6.86

-6.29

-5.68

DKSRPPRP

9.44

-5.02

-4.41

RPPRPPPK

10.55

-3.49

-2.88

P08458

PKRKPPKL

9.44

-4.74

-4.13

LPKRKPPK

10.59

-5.82

-5.21

NLPKRKPP

10.63

-5.22

-4.61

P43603

TAPTSPST

13.83

-2.21

-1.60

P40095

VLPPPRSP

8.98

-5.54

-4.93

PRSPNRPT

9.07

-4.59

-3.98

PPPRSPNR

10.61

-4.06

-3.45

Q12168

PYFPQFRS

10.85

-4.59

-3.98

RGPPPLPP

11.78

-4.56

-3.95

PVPKPNID

12.06

-4.41

-3.80

Q06449

NGPSNLPP

12.47

-3.22

-2.61

NLPPPPQY

13.39

-3.53

-2.92

YQQPQQQP

13.61

-3.57

-2.96

P32793

PTHPSNMS

12.81

-4.76

-4.15

HGPTHPSN

13.38

-2.71

-2.10

GHGPTHPS

14.25

-2.43

-1.82

P32790

PIKPPRPT

8.20

-5.46

-4.85

PAMPARPT

8.27

-6.39

-5.78

IKPPRPTS

12.70

-3.84

-3.23

Q01389

PSTPSRPV

9.71

-4.06

-3.45

KRSKPLPP

10.79

-5.09

-4.48

GRRYPQTP

11.76

-4.50

-3.89

P53974

LKPKPPPK

10.39

-4.12

-3.51

TKPTPPPK

10.91

-2.47

-1.86

PKPPPKPL

11.03

-4.12

-3.51

Q06836

GSRGPLLP

11.63

-4.91

-4.30

KNKPPLSP

12.56

-4.63

-4.02

SRGPLLPD

12.93

-2.73

-2.12

Q05580

QLPPPKPK

11.42

-4.51

-3.90

PPPKPKVQ

12.84

-4.47

-3.86

LPPPKPKV

13.26

-3.89

-3.28

P53933

TRRRPPPP

8.00

-6.63

-6.02

RRRPPPPP

10.59

-4.44

-3.83

RRPPPPPI

11.62

-3.99

-3.38

Q04439

PTPPQNRD

11.36

-5.42

-4.81

SKPKEPMF

11.70

-4.13

-3.52

GSPSELPL

12.31

-3.26

-2.65

Q08873

STKKPRPP

6.92

-4.77

-4.16

KKPRPPVK

9.36

-4.77

-4.16

PRPPVKSK

11.48

-3.96

-3.35

P38885

AAPPSPEN

14.50

-2.14

-1.53

P50942

PCPPIRRK

6.95

-6.51

-5.90

STPKPLPP

10.57

-5.55

-4.94

IVPRPCPP

10.85

-4.30

-3.69

P48415

PKTKPRSG

8.48

-5.28

-4.67

TKPRSGPI

11.00

-3.72

-3.11

GGPKTKPR

11.21

-4.40

-3.79

P40563

PSERPKRR

7.98

-5.48

-4.87

VNPGQLPP

12.65

-4.39

-3.78

RAPPPVPK

12.85

-3.38

-2.77

P38822

PEVPPPRR

14.12

-4.37

-3.76

DTPTTTPG

14.38

-1.97

-1.36

Q12134

PVPSPMNS

11.29

-3.50

-2.89

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER