ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 1EFN2.PDB
Scoring matrix: 1EFN2_mat
Uniprot code: P06241
Genome source: Homo sapiens
Wild-type ligand: RPQVPLRPMTY
Foldx wt ligand score: 1.95
Foldx random average score for Homo sapiens: 8.202

Available information for P06241 in MINT (Nov 2008):
Nš of interacting proteins: 29
 Proteins belonging to other specie: 8
Nš of interactions described: 52
 Interactions with other species: 15

Genome scanning information:
Subcellular location: True
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 7744
Proteins considered as fragments or having non-standard amino acids: 22829
Total scanned proteins: 40317
 Total fragments: 18170188
Proteins after random average filtering: 40287
 Total fragments: 8617287
Proteins after disorder filtering: 28611
 Total fragments: 678715
Proteins after pattern filtering: 21314
 Total fragments: 278064
Proteins after MINT filtering: 15
 Total fragments: 489


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

RPQVPLRPMTY

1.95

-8.98

0.00

Best peptides

MPRMPHRRRHF

0.00

-9.22

-0.24

         
Interactors      
P54253

TASPPAIPVHL

6.05

-6.46

2.52

PGNPGGRGHGG

6.11

-5.73

3.25

LPGNPGGRGHG

6.22

-6.87

2.11

P11137

TPGTPSYPRTP

5.32

-6.99

1.99

YPRTPHTPGTP

5.37

-6.05

2.93

TPHTPGTPKSA

5.78

-5.86

3.12

O15117

PPPKPNRPPNV

2.00

-11.63

-2.65

GPLKPAREDSE

2.40

-9.86

-0.88

VPSLPPRNIKP

2.67

-10.90

-1.92

P22681

PPPPPDRPYSV

2.83

-11.87

-2.89

AESRPQRRPLP

3.54

-9.85

-0.87

RPDVPRLGSTF

3.98

-8.62

0.36

Q13177

PPAPPVRMSST

2.81

-10.95

-1.97

KPPAPPVRMSS

5.32

-7.45

1.53

PAPPVRMSSTI

6.91

-5.19

3.79

Q13283

PPQRGPRPIRE

4.22

-8.50

0.48

VPASQPRPESK

5.49

-8.17

0.81

RGPGGPRGGLG

5.67

-5.46

3.52

P25445

KPCPPGERKAR

5.43

-7.59

1.39

PCPPGERKARD

5.90

-7.33

1.65

FCHKPCPPGER

6.95

-5.35

3.63

Q13444

RPGPPQRALLA

2.45

-11.24

-2.26

PLVVPSRPAPP

3.38

-10.59

-1.61

AKPPPPRKPLP

4.38

-10.11

-1.13

P42768

PPPPPSRGGNQ

2.82

-10.60

-1.62

GPPPPGRGGPP

3.11

-9.01

-0.03

PPLPPALVPAG

4.87

-7.28

1.70

P16333

KPSVPDSASPA

5.43

-7.71

1.27

EPSPPQCDYIR

6.06

-6.04

2.94

VKRKPSVPDSA

6.17

-6.19

2.79

Q9Y5K6

RPKMPGRRLPG

0.98

-12.88

-3.90

YPKRPEKPVPP

4.24

-8.04

0.94

GTVYPKRPEKP

4.42

-7.76

1.22

P29353

PPPCPGRELFD

2.63

-11.00

-2.02

RRKPCSRPLSS

4.93

-8.17

0.81

MPPPPPCPGRE

5.29

-8.57

0.41

P12931

TPSKPASADGH

5.44

-6.45

2.53

ASQTPSKPASA

6.99

-5.33

3.65

P06729

PPLPRPRVQPK

2.88

-10.87

-1.89

PPPPGHRVQHQ

4.18

-9.62

-0.64

KGPPLPRPRVQ

4.29

-10.15

-1.17

P35968

GPQPLPIHVGE

6.19

-6.59

2.39

PQPLPIHVGEL

6.85

-5.75

3.23

 


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