ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: 1AZE2.PDB
Scoring matrix: 1AZE2_mat
Uniprot code: P62993
Genome source: Homo sapiens
Wild-type ligand: VPPPVPPRRR
Foldx wt ligand score: 4.05
Foldx random average score for Homo sapiens: 9.188

Available information for P62993 in MINT (Nov 2008):
Nš of interacting proteins: 64
 Proteins belonging to other specie: 6
Nš of interactions described: 157
 Interactions with other species: 28

Genome scanning information:
Subcellular location: True
Proteins in genome Homo sapiens: 70890
Proteins located in other compartments: 15831
Proteins considered as fragments or having non-standard amino acids: 22829
Total scanned proteins: 32230
 Total fragments: 13515704
Proteins after random average filtering: 32213
 Total fragments: 7347589
Proteins after disorder filtering: 24002
 Total fragments: 604923
Proteins after pattern filtering: 17322
 Total fragments: 187015
Proteins after MINT filtering: 8
 Total fragments: 264


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

VPPPVPPRRR

4.05

-9.29

0.00

Best peptides

DWFPMPRMGR

0.00

-9.72

-0.43

         
Interactors      
P27986

KKISPPTPKP

6.09

-6.32

2.97

PRPPRPLPVA

6.30

-6.98

2.31

PKPPKPTTVA

6.37

-6.51

2.78

Q07889

VPPPVPPRRR

4.05

-10.52

-1.23

SPPAIPPRQP

4.14

-8.19

1.10

AGPPVPPRQS

4.39

-9.31

-0.02

Q9UKW4

PCVPKPVDYS

6.52

-6.11

3.18

PCPCVPKPVD

7.14

-6.08

3.21

VKPCPCVPKP

8.81

-4.89

4.40

Q07890

IPPPLPPRKK

3.60

-9.84

-0.55

DPPAIPPRQP

4.07

-9.55

-0.26

PAPPVPPRQN

4.31

-8.89

0.40

Q9UQC2

VYIPMSPGAH

4.94

-6.65

2.64

PRPPKPSQAE

5.44

-6.90

2.39

SEDNYVPMNP

6.06

-6.73

2.56

Q13905

PPFQLPLGGH

4.23

-6.25

3.04

PPPALPPKKR

4.93

-8.55

0.74

PKPPLPGIRV

5.36

-8.15

1.14

Q13480

SSPKTPPRRP

4.97

-8.53

0.76

PRPPKPHPAH

5.13

-7.67

1.62

NTYQIPRTFP

5.58

-6.28

3.01

P58107

PREPGPAGRG

6.72

-5.75

3.54

QDAWRGPREP

7.69

-6.53

2.76

QDARRGPREP

8.15

-6.55

2.74

 


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