ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: ABP1_1JO8-21.PDB
Scoring matrix: ABP1_1JO8-21_mat
Uniprot code: P15891
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 19.55
Foldx random average score for Saccharomyces cerevisiae: 17.749

Available information for P15891 in MINT (Nov 2008):
Nš of interacting proteins: 39
 Proteins belonging to other specie: 0
Nš of interactions described: 88
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3200363
Proteins after random average filtering: 7179
 Total fragments: 1708437
Proteins after disorder filtering: 4334
 Total fragments: 62487
Proteins after pattern filtering: 1690
 Total fragments: 4301
Proteins after MINT filtering: 31
 Total fragments: 131

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAGGAAAA

19.55

-1.04

0.00

Best peptides

RKKLGIPKRH

0.00

-6.10

-5.06

         
Interactors      
P09119

LTPTTSPVKK

15.00

-4.35

-3.31

TPTTSPVKKS

15.88

-4.20

-3.16

AQVPLTPTTS

15.94

-3.15

-2.11

P40325

YVQPGDPRLG

12.22

-7.58

-6.54

LPWTYPPRFY

14.28

-4.19

-3.15

PRPPRPAANL

15.49

-4.89

-3.85

P16649

PLGPEYNVFA

14.78

-3.45

-2.41

HSKPIPPFLL

15.01

-3.95

-2.91

P48562

PYRPHHNMIN

13.43

-4.25

-3.21

PLNPYRPHHN

14.15

-4.02

-2.98

HVQPVAPKND

14.78

-3.42

-2.38

P40341

LNDPSNPVSK

14.22

-5.20

-4.16

P17555

PRPKKPSTLK

11.37

-6.38

-5.34

PKKPSTLKTK

11.63

-7.08

-6.04

PPRPKKPSTL

16.02

-3.90

-2.86

P40494

QPPNMMPVTH

14.38

-3.65

-2.61

PPNMMPVTHV

16.04

-5.00

-3.96

P37298

PQKPGGVRGT

14.41

-5.75

-4.71

VLPQKPGGVR

14.90

-4.79

-3.75

PVLPQKPGGV

17.66

-1.82

-0.78

P04050

GFSPTSPTYS

13.07

-3.18

-2.14

GYSPGSPAYS

13.75

-3.12

-2.08

NYSPTSPSYS

15.05

-2.45

-1.41

P40095

PRSPNRPTLS

11.89

-5.74

-4.70

Q12168

PNRPGGTTNR

10.54

-6.34

-5.30

NDDPYFPQFR

14.41

-3.84

-2.80

GPPPLPPRAN

17.25

-7.31

-6.27

P08458

LPKRKPPKLQ

12.12

-4.64

-3.60

Q06449

QQPQQQPQQA

15.57

-2.67

-1.63

P32793

GHGPTHPSNM

16.22

-2.67

-1.63

HGPTHPSNMS

16.99

-3.34

-2.30

P32790

APAPLDPFKT

15.38

-4.20

-3.16

PPRPTSTTSV

15.45

-2.96

-1.92

IKPPRPTSTT

15.56

-5.02

-3.98

Q06337

PRKPLDCKNM

13.14

-4.92

-3.88

PPPKSSPSQS

16.88

-2.51

-1.47

Q01389

RRYPQTPSYY

12.58

-5.18

-4.14

RSKPLPPQLL

14.24

-4.91

-3.87

IASPTSPKSL

15.29

-2.93

-1.89

P22082

GRPRGRPKKV

10.76

-5.60

-4.56

RPRGRPKKVK

13.82

-4.69

-3.65

VSPAGPSSVH

14.76

-2.83

-1.79

P53974

TPPPKPSHLK

13.82

-5.16

-4.12

Q06836

KPPLSPSSFI

15.22

-4.77

-3.73

NKPPLSPSSF

15.57

-4.05

-3.01

PLLPDDANII

15.88

-3.40

-2.36

Q05580

LPPPKPKVQI

15.49

-3.16

-2.12

P53933

VSYPGNPTSR

11.71

-4.12

-3.08

PPPPIPSTQK

13.67

-4.33

-3.29

APPPLPNRQL

15.01

-7.12

-6.08

Q04439

SSKPKEPMFE

13.48

-5.24

-4.20

NNIPTPPQNR

13.62

-5.90

-4.86

PKEPMFEAAY

15.41

-4.51

-3.47

Q08873

TKKPRPPVKS

12.50

-6.08

-5.04

FPVLGPQLST

17.40

-3.48

-2.44

P38885

AAPPSPENSH

15.56

-3.19

-2.15

PPSPENSHQD

15.60

-2.94

-1.90

P50942

VPRPCPPIRR

10.42

-6.95

-5.91

PPPPTSRHNK

15.58

-4.28

-3.24

LPPPPPTSRH

15.60

-5.05

-4.01

P48415

NLLPMEPNHQ

13.63

-4.23

-3.19

IVSPKPPVVK

14.27

-4.60

-3.56

NYSPYVPQST

14.79

-3.18

-2.14

P40563

NSQPQGPSDT

17.25

-1.41

-0.37

P38822

APEVPPPRRS

17.33

-6.92

-5.88

Q12134

QPVPSPMNSQ

17.29

-2.03

-0.99

P47976

WLPSKPNCYH

12.84

-3.23

-2.19

PWLPSKPNCY

14.37

-3.08

-2.04

TLPINNPFAG

17.10

-3.62

-2.58

 


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