ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: ABP1_1JO8-17.PDB
Scoring matrix: ABP1_1JO8-17_mat
Uniprot code: P15891
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.41
Foldx random average score for Saccharomyces cerevisiae: 18.837

Available information for P15891 in MINT (Nov 2008):
Nš of interacting proteins: 39
 Proteins belonging to other specie: 0
Nš of interactions described: 88
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1466055
Proteins after disorder filtering: 4566
 Total fragments: 80163
Proteins after pattern filtering: 2013
 Total fragments: 7640
Proteins after MINT filtering: 34
 Total fragments: 233

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

16.41

3.57

0.00

Best peptides

RRKRNGRSW

0.00

-4.97

-8.54

         
Interactors      
P09119

AQVPLTPTT

18.83

2.23

-1.34

P40325

SRPHQRPST

12.82

-1.36

-4.93

PPRPPRPAA

13.28

-1.96

-5.53

RPPRPAANL

13.81

-4.45

-8.02

P53145

PLLPPLPGQ

16.00

-1.58

-5.15

PPLPGQPPL

18.01

-2.08

-5.65

Q08957

TEPTPGPSS

14.28

1.04

-2.53

LPSTPTRPL

14.97

-1.77

-5.34

CILPSTPTR

15.56

-2.58

-6.15

P16649

NHSKPIPPF

15.14

-2.10

-5.67

NGSPLGPEY

15.22

1.51

-2.06

KPIPPFLLD

16.24

-0.09

-3.66

P48562

NPYRPHHNM

12.08

-6.08

-9.65

GQFPRGPMH

12.88

-1.86

-5.43

PRPPSSNSQ

14.25

1.17

-2.40

P40341

KPPLNDPSN

14.04

-4.44

-8.01

PPPPPKPPL

16.41

-3.08

-6.65

P17555

RPKKPSTLK

12.98

-3.94

-7.51

SGPPPRPKK

13.74

-1.91

-5.48

PPRPKKPST

13.88

-1.88

-5.45

P40494

PRPPPKPLH

13.62

-3.01

-6.58

NQPPNMMPV

17.13

1.22

-2.35

P37298

LPQKPGGVR

13.67

-3.12

-6.69

PQKPGGVRG

17.34

0.40

-3.17

PVLPQKPGG

17.95

0.42

-3.15

P43603

FTAPTSPST

14.65

0.45

-3.12

APTSPSTSS

16.55

0.71

-2.86

RFTAPTSPS

18.20

0.27

-3.30

P04819

SIPSSAPSS

18.12

1.43

-2.14

P40095

PRSPNRPTL

11.86

-1.86

-5.43

LPPPRSPNR

14.38

-4.63

-8.20

FPDSPSSSS

14.56

-0.73

-4.30

Q12168

VPNRPGGTT

13.33

-2.28

-5.85

NDDPYFPQF

14.12

-0.16

-3.73

PPVPNRPGG

14.50

-1.70

-5.27

P08458

NLPKRKPPK

14.48

-4.48

-8.05

LPKRKPPKL

17.10

-4.22

-7.79

PITNPSSSS

18.40

0.59

-2.98

Q06449

YQQPQQQPQ

17.53

-0.84

-4.41

PFPPPSTNY

17.80

-1.56

-5.13

P32793

GHGPTHPSN

16.14

-0.09

-3.66

PTHPSNMSN

16.74

-0.11

-3.68

GPTHPSNMS

18.21

1.11

-2.46

P32790

GPPPAMPAR

13.92

-2.01

-5.58

KPPRPTSTT

14.16

-1.85

-5.42

PIKPPRPTS

16.00

-2.99

-6.56

Q06337

RPNPTQPRK

13.49

-3.32

-6.89

PPPKSSPSQ

14.07

-0.98

-4.55

NTPRPNPTQ

14.13

-1.69

-5.26

Q01389

RRYPQTPSY

8.74

-4.81

-8.38

RPVPPDSSY

10.48

-3.96

-7.53

YPQTPSYYY

11.81

-3.26

-6.83

P22082

GRPRGRPKK

10.06

-4.07

-7.64

AGRPRGRPK

13.61

-0.94

-4.51

PRGRPKKVK

14.15

-1.96

-5.53

P53974

PTPPPKPSH

13.00

-1.68

-5.25

PPPKPSHLK

15.51

-2.10

-5.67

PKPPPKPLL

15.65

-2.45

-6.02

Q06836

NKPPLSPSS

14.09

1.27

-2.30

KNKPPLSPS

18.02

0.05

-3.52

Q05580

QLPPPKPKV

15.72

-3.90

-7.47

PPPKPKVQI

17.70

-1.45

-5.02

P53933

PPPPPIPST

15.18

-1.39

-4.96

NDLPMELPH

16.22

1.03

-2.54

VAPPPLPNR

17.34

-2.14

-5.71

Q04439

RPSPPTAAT

13.54

-1.72

-5.29

APPPPGMQN

15.01

-1.06

-4.63

SSKPKEPMF

15.57

-1.09

-4.66

Q08873

KPRPPVKSK

12.92

-4.99

-8.56

PVLGPQLST

17.21

1.82

-1.75

STKKPRPPV

17.49

-1.02

-4.59

P38885

APPSPENSH

15.52

-1.39

-4.96

PPSPENSHQ

18.82

-0.74

-4.31

P50942

RPCPPIRRK

11.16

-6.25

-9.82

KPLPPVPAL

13.59

-3.06

-6.63

PCPPIRRKS

15.12

-0.08

-3.65

P04050

PPVRPSISF

10.43

-4.07

-7.64

NYSPTSPSY

12.78

0.22

-3.35

AYSPTSPSY

13.96

-0.67

-4.24

P48415

PPPPPIVKR

14.28

-2.70

-6.27

FPAPPKLGT

14.47

-2.37

-5.94

PVSPYGQAT

15.31

1.79

-1.78

P40563

PSERPKRRA

14.19

-3.48

-7.05

NSQPQGPSD

14.59

1.87

-1.70

RAPPPVPKK

15.50

-2.71

-6.28

Q12134

PVPSPMNSQ

16.54

1.52

-2.05

P47976

RPSPWLPSK

11.17

-4.22

-7.79

YSPRPSPWL

12.09

-2.42

-5.99

LPSKPNCYH

14.05

-2.33

-5.90

 


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