ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: ABP1_1JO8-15.PDB
Scoring matrix: ABP1_1JO8-15_mat
Uniprot code: P15891
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 20.38
Foldx random average score for Saccharomyces cerevisiae: 15.210

Available information for P15891 in MINT (Nov 2008):
Nš of interacting proteins: 39
 Proteins belonging to other specie: 0
Nš of interactions described: 88
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1292450
Proteins after disorder filtering: 3923
 Total fragments: 40134
Proteins after pattern filtering: 1594
 Total fragments: 5018
Proteins after MINT filtering: 32
 Total fragments: 172

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAA

20.38

0.57

0.00

Best peptides

RHRMRRKRR

0.00

-10.48

-11.05

         
Interactors      
P09119

TPTTSPVKK

13.22

-5.46

-6.03

P40325

RPHQRPSTM

9.69

-7.91

-8.48

SLPWTYPPR

11.01

-5.73

-6.30

RPPRPAANL

11.64

-10.68

-11.25

P53145

LPGQPPLIN

13.16

-3.70

-4.27

Q08957

CILPSTPTR

12.71

-4.97

-5.54

P16649

KPIPPFLLD

13.79

-4.46

-5.03

NHSKPIPPF

14.59

-3.48

-4.05

HSKPIPPFL

14.66

-1.81

-2.38

P48562

SPSPLNPYR

10.66

-3.62

-4.19

NPYRPHHNM

10.74

-7.08

-7.65

RQAPKRPDA

13.17

-6.46

-7.03

P40341

KPPLNDPSN

13.97

-2.16

-2.73

NDPSNPVSK

15.08

-2.70

-3.27

P17555

RPKKPSTLK

9.78

-8.94

-9.51

SGPPPRPKK

12.73

-4.32

-4.89

PRPKKPSTL

13.49

-3.01

-3.58

P40494

RPPRPPPKP

12.14

-11.90

-12.47

QPPNMMPVT

13.21

-3.86

-4.43

KPTLIPDNG

14.52

-3.70

-4.27

P37298

LPQKPGGVR

9.79

-6.14

-6.71

P04050

LPVPPPPVR

11.00

-7.34

-7.91

PPPPVRPSI

12.76

-4.48

-5.05

PPPVRPSIS

14.60

-4.09

-4.66

P40095

RIPVLPPPR

9.26

-11.02

-11.59

LPPPRSPNR

11.27

-6.04

-6.61

PRSPNRPTL

13.88

-3.14

-3.71

Q12168

RGPPPLPPR

11.65

-7.38

-7.95

QHPVPKPNI

11.95

-3.87

-4.44

DDPYFPQFR

12.07

-4.56

-5.13

P08458

LPKRKPPKL

11.36

-8.04

-8.61

NLPKRKPPK

11.84

-5.43

-6.00

PKRKPPKLQ

13.43

-5.49

-6.06

Q06449

QQPQQQPQQ

13.96

-2.29

-2.86

P32793

HGPTHPSNM

14.14

-3.17

-3.74

GHGPTHPSN

14.54

-1.41

-1.98

P32790

GPPPAMPAR

10.88

-4.79

-5.36

KPPRPTSTT

12.65

-6.97

-7.54

APLDPFKTG

15.08

-3.80

-4.37

Q06337

RPNPTQPRK

9.42

-8.84

-9.41

QPRKPLDCK

10.56

-5.46

-6.03

MASLPISPR

12.03

-3.73

-4.30

P22082

GRPRGRPKK

8.93

-7.83

-8.40

PRGRPKKVK

11.46

-5.73

-6.30

RPRGRPKKV

11.78

-7.13

-7.70

P53974

PPPKPSHLK

12.98

-4.55

-5.12

KPPPKPLLL

13.16

-5.33

-5.90

PPPKPLLLA

13.55

-5.19

-5.76

Q01389

SPSYPSIFR

11.14

-5.42

-5.99

KRSKPLPPQ

11.63

-6.26

-6.83

PSYPSIFRR

12.18

-2.63

-3.20

Q05580

PPPKPKVQI

12.62

-4.79

-5.36

LPPPKPKVQ

13.56

-4.16

-4.73

NLPQLPPPK

14.56

-3.93

-4.50

P53933

VAPPPLPNR

11.97

-4.71

-5.28

SYPGNPTSR

13.30

-3.74

-4.31

PPPLPNRQL

13.82

-6.16

-6.73

Q04439

NIPTPPQNR

12.01

-6.97

-7.54

KPAPPPPGM

13.71

-5.49

-6.06

PPPPGMQNK

14.06

-3.96

-4.53

Q08873

KPRPPVKSK

12.03

-5.28

-5.85

KKPRPPVKS

12.59

-8.67

-9.24

TKKPRPPVK

13.92

-3.60

-4.17

Q06836

KPPLSPSSF

13.81

-3.47

-4.04

P50942

RPCPPIRRK

9.48

-9.18

-9.75

PRPCPPIRR

10.20

-6.87

-7.44

VPRPCPPIR

10.44

-5.99

-6.56

P48415

PPPPPIVKR

10.36

-5.99

-6.56

RPPVIPLGT

11.70

-5.27

-5.84

PPPPIVKRK

12.58

-5.64

-6.21

P40563

RAPPPVPKK

12.21

-6.91

-7.48

RRAPPPVPK

13.82

-6.34

-6.91

NPGQLPPSL

14.12

-4.38

-4.95

P38822

APEVPPPRR

9.06

-8.50

-9.07

Q12134

HQPVPSPMN

11.83

-2.27

-2.84

P47976

RPSPWLPSK

10.19

-6.55

-7.12

LPSKPNCYH

13.51

-6.16

-6.73

YSPRPSPWL

14.36

-3.71

-4.28

 


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