ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: ABP1_1JO8-14.PDB
Scoring matrix: ABP1_1JO8-14_mat
Uniprot code: P15891
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 19.89
Foldx random average score for Saccharomyces cerevisiae: 15.310

Available information for P15891 in MINT (Nov 2008):
Nš of interacting proteins: 39
 Proteins belonging to other specie: 0
Nš of interactions described: 88
 Interactions with other species: 0

Genome scanning information:
Subcellular location: False
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7179
 Total fragments: 3207542
Proteins after random average filtering: 7179
 Total fragments: 1407954
Proteins after disorder filtering: 4056
 Total fragments: 43999
Proteins after pattern filtering: 1674
 Total fragments: 5166
Proteins after MINT filtering: 32
 Total fragments: 191

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAA

19.89

0.28

0.00

Best peptides

YWPRRWRKI

0.00

-7.12

-7.40

         
Interactors      
P09119

TPTTSPVKK

11.89

-4.87

-5.15

LTPTTSPVK

13.64

-5.26

-5.54

P40325

RPPRPAANL

9.85

-9.19

-9.47

RPHQRPSTM

11.87

-7.78

-8.06

QPPRPPRPA

12.17

-4.47

-4.75

Q08957

LPSTPTRPL

15.01

-5.70

-5.98

P16649

SKPIPPFLL

13.51

-4.07

-4.35

NHSKPIPPF

14.20

-3.08

-3.36

GSPSAFPVQ

14.89

-4.12

-4.40

P48562

NPYRPHHNM

8.07

-8.36

-8.64

KPPISAPRA

12.23

-3.86

-4.14

GVAKPKKPA

13.50

-3.69

-3.97

P40341

PPPKPPLND

14.04

-2.94

-3.22

NDPSNPVSK

14.18

-3.06

-3.34

P17555

RPKKPSTLK

10.61

-7.80

-8.08

PPPRPKKPS

11.48

-7.05

-7.33

PRPKKPSTL

12.65

-6.70

-6.98

P40494

KPTLIPDNG

14.06

-3.62

-3.90

RPPRPPPKP

14.42

-9.44

-9.72

PPNMMPVTH

14.46

-4.99

-5.27

P37298

LPQKPGGVR

13.52

-6.61

-6.89

P04050

PPPPVRPSI

12.17

-6.59

-6.87

PPVRPSISF

12.94

-8.38

-8.66

YSPTSPSYS

13.89

-1.96

-2.24

P40095

RIPVLPPPR

11.49

-10.13

-10.41

LPPPRSPNR

13.81

-7.67

-7.95

SPNRPTLSD

14.74

-4.59

-4.87

Q12168

QHPVPKPNI

11.86

-3.98

-4.26

VPNRPGGTT

14.11

-4.92

-5.20

DDPYFPQFR

14.41

-4.97

-5.25

P08458

LPKRKPPKL

8.84

-7.73

-8.01

NLPKRKPPK

10.60

-7.52

-7.80

PKRKPPKLQ

11.23

-5.08

-5.36

Q06449

QQPQQQPQQ

13.39

-4.36

-4.64

YQQPQQQPQ

14.75

-2.66

-2.94

P32793

HGPTHPSNM

13.89

-4.54

-4.82

P32790

KPPRPTSTT

11.55

-6.82

-7.10

PPIKPPRPT

14.26

-4.97

-5.25

GPPPAMPAR

14.87

-6.07

-6.35

Q06337

NTPRPNPTQ

10.35

-8.14

-8.42

QPRKPLDCK

10.49

-5.94

-6.22

RPNPTQPRK

11.63

-7.61

-7.89

Q01389

KRSKPLPPQ

9.72

-5.83

-6.11

APTKPNPQG

13.11

-5.61

-5.89

YPQTPSYYY

13.79

-3.52

-3.80

P22082

GRPRGRPKK

6.72

-8.47

-8.75

PRGRPKKVK

9.07

-10.15

-10.43

RPRGRPKKV

13.43

-6.98

-7.26

P53974

PPPKPLLLA

11.51

-4.78

-5.06

PPPKPSHLK

12.03

-6.49

-6.77

KPPPKPLLL

13.93

-5.91

-6.19

Q06836

KPPLSPSSF

13.90

-3.90

-4.18

PPLSPSSFI

14.77

-4.17

-4.45

Q05580

PPPKPKVQI

9.83

-6.73

-7.01

LPPPKPKVQ

13.79

-4.79

-5.07

NLPQLPPPK

15.12

-6.76

-7.04

P53933

PPPIPSTQK

13.25

-3.47

-3.75

APPPLPNRQ

13.57

-5.42

-5.70

PPPLPNRQL

13.63

-7.60

-7.88

Q04439

NIPTPPQNR

12.63

-7.93

-8.21

PSSKPKEPM

13.46

-4.39

-4.67

SKPKEPMFE

14.00

-1.32

-1.60

Q08873

KKPRPPVKS

9.35

-8.35

-8.63

STKKPRPPV

13.54

-7.31

-7.59

KPRPPVKSK

13.80

-7.85

-8.13

P38885

PPSPENSHQ

14.11

-4.24

-4.52

P50942

IVPRPCPPI

11.11

-7.87

-8.15

RPCPPIRRK

11.41

-8.64

-8.92

PRPCPPIRR

12.47

-8.41

-8.69

P48415

LLPMEPNHQ

11.81

-5.77

-6.05

PPVIPLGTQ

12.13

-6.02

-6.30

SPSSPISRI

12.24

-6.22

-6.50

P40563

PSERPKRRA

10.84

-8.63

-8.91

RAPPPVPKK

13.31

-5.85

-6.13

PPPVPKKPS

14.60

-4.26

-4.54

P38822

APEVPPPRR

11.94

-8.90

-9.18

Q12134

PVPSPMNSQ

13.68

-4.98

-5.26

P47976

YSPRPSPWL

10.92

-5.42

-5.70

RPSPWLPSK

12.03

-7.19

-7.47

LPSKPNCYH

12.56

-7.31

-7.59

 


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