|
Matrix information:
(Help)
ADAN-name: 1ABO2.PDB
Scoring matrix: 1ABO2_mat
Uniprot code: P00520
Genome source: Mus musculus
Wild-type ligand: APTMPPPLPP
Foldx wt ligand score: 3.09
Foldx random average score for Mus musculus: 11.953 Available information for P00520 in MINT (Nov 2008):
Nš of interacting proteins: 12
Proteins belonging to other specie: 5
Nš of interactions described: 23
Interactions with other species: 7
Genome scanning information:
Subcellular location: False
Proteins in genome Mus musculus: 58346
Proteins located in other compartments: 0
Proteins considered as fragments or having non-standard amino acids: 13900
Total scanned proteins: 44446
Total fragments: 20375566
Proteins after random average filtering: 44442
Total fragments: 12012892
Proteins after disorder filtering: 32562
Total fragments: 1259974
Proteins after pattern filtering: 23397
Total fragments: 423366
Proteins after MINT filtering: 7
Total fragments: 293
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
APTMPPPLPP |
3.09
|
-13.57 |
0.00 |
| Best peptides |
MPRNKMMRIY |
0.00
|
-12.79 |
0.78 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06649 |
PPTSEPPPVP |
4.56
|
-13.03 |
0.54 |
|
PPAYPPPPVP |
4.89
|
-12.76 |
0.81 |
|
YPPAYPPPPV |
5.37
|
-12.38 |
1.19 |
| Q8CBW3 |
PPTQKPPSPP |
3.12
|
-13.89 |
-0.32 |
|
APPPPPMPQL |
5.60
|
-12.17 |
1.40 |
|
APGAAPGSQY |
5.61
|
-9.55 |
4.02 |
| O70469 |
VPGMRPGAPE |
5.89
|
-11.42 |
2.15 |
|
PPPHLPDPLY |
6.30
|
-10.85 |
2.72 |
|
MPTVLPRPES |
6.34
|
-10.39 |
3.18 |
| O35716 |
APVRPRPCPA |
6.06
|
-11.10 |
2.47 |
|
AAPVRPRPCP |
6.74
|
-9.12 |
4.45 |
|
CPAVPAPAPG |
6.94
|
-9.78 |
3.79 |
| P70429 |
PPPPPPPVPP |
5.27
|
-14.15 |
-0.58 |
|
PPPPPPPPVP |
5.46
|
-14.13 |
-0.56 |
|
PPPPPPVPPP |
5.97
|
-13.37 |
0.20 |
| P97814 |
SPKTTPSAPA |
7.78
|
-9.00 |
4.57 |
|
STGREPPAPV |
8.21
|
-9.77 |
3.80 |
|
PLIGSPSIQP |
8.60
|
-7.59 |
5.98 |
| P55194 |
APTMPPPLPP |
3.09
|
-13.48 |
0.09 |
|
PPPALPPQPP |
4.51
|
-12.62 |
0.95 |
|
MPPPLPPVPP |
4.69
|
-13.89 |
-0.32 |
|
